Principal Investigator: Jeffrey J. Gray, Ph.D.
Jeffrey J. Gray's research focuses on computational protein structure prediction and design, particularly protein-protein docking, therapeutic antibodies, and protein-surface interactions. Gray's lab leads the development of RosettaDock, RosettaAntibody, the ROSIE web server, and the PyRosetta interactive platform for protein structure prediction and design; these tools are used widely by the research community. Gray's lab has produced the most accurate complex structure for several targets in the CAPRI blind protein-protein docking challenge and sub-angstrom antibody binding loop structures in the Antibody Modeling Assessment. Gray's work has been funded by NIH, NSF, DARPA, ACS, the Beckman Foundation, and the UCB pharmaceutical company. As of March 2016, he has authored over 72 papers which have attracted over 4,200 citations. He has supervised 10 post-docs, 20 graduate students, 45 undergraduate students, and several high school students.


Jason W. Labonte, Ph.D.
  • Ph.D., Chemistry, Johns Hopkins University
  • B.S., Biochemistry, Grove City College
  • Email: jwlabonte[at]
  • CV


Sergey Lyskov
  • Software Engineer
  • Lead Test Engineer for the Rosetta Project
  • Build Engineer for the PyRosetta Project
  • M.S., Physics, Moscow Engineering Physics Institute
  • Email: sergey dot lyskov at jhu dot edu
Matt Mulqueen
  • Systems Administrator
  • Rosetta Systems Administrator for testing, PyRosetta, and ROSIE facilities
  • Email: support at graylab dot jhu dot edu

Graduate Students

Nick Marze
  • Chemical & Biomolecular Engineering Ph.D. Student
  • B.S., Chemical Engineering, University of Delaware
Shourya Sonkar Roy Burman
  • Chemical & Biomolecular Engineering Ph.D. Student
  • B.Tech., Biological Sciences and Bioengineering, Indian Institute of Technology, Kanpur
  • Email: ssrb at jhu dot edu
Jeliazko Jeliazkov
  • Program in Molecular Biophysics Ph.D. Student
  • B.S., Physics, University of Illinois at Urbana-Champaign
  • Email: jeliazkov at jhu dot edu
Naireeta Biswas
  • Chemical & Biomolecular Engineering M.S. Student
  • B.Tech., Chemical Engineering, Manipal Institute of Technology, Manipal
  • Email: nbiswas1 at jhu dot edu
Joseph Lubin
  • Chemical & Biomolecular Engineering M.S.E. Student
  • B.S., Chemical Engineering & Biochemistry, University of Wisconsin, Madison
Rebecca Alford
  • Chemical & Biomolecular Engineering Ph.D. Student
  • B.S. Chemistry, Carnegie Mellon University
  • Hertz Fellow, NSF GRFP Fellow
  • Email
Morgan Nance
  • Program in Molecular Biophysics Ph.D. student
  • B.S. Biochemistry and Molecular Biology, University of California at Davis
Xiyao Long
  • Chemical & Biomolecular Engineering M.S.E. Student
  • B.S., Biochemistry, Illinois Institute of Technology


Kayvon Tabrizi
  • Chemical & Biomolecular Engineering Sophomore
  • Made this awesome website
Kathy (Shusheng) Wang
  • Chemical & Biomolecular Engineering Junior
Nikhil Shah
  • Chemical & Biomolecular Engineering Junior
  • Applied Mathematics & Statistics
Paige Stanley
  • Chemical & Biomolecular Engineering Junior
  • Applied math & statistics

High School Students